Berries Health Eye Disorders and Retinopathies (Eye) Panel  

The Berries Health Eye Disorders and Retinopathies Panel investigates genetic variations linked to various eye disorders, including night blindness, color blindness, retinitis pigmentosa, nystagmus, age-related macular degeneration, cataracts, glaucoma, microphthalmia, severe vision reduction, and more, as documented at the end of this pamphlet. 

Schedule a complimentary appointment for a genetic assessment and discuss your concerns with our genetic specialist at Berries Health and Genetics.

To download the Genetic Tests Form, please click HERE

Understanding Eye Disorders 

Eye disorders are defined as conditions affecting the retina, cornea, ophthalmic muscles, and optic nerves. There are numerous eye diseases and vision problems. In the U.S., over 3.4 million individuals aged 40 and older qualify as legally blind (visual acuity of 20/200 or less). Furthermore, nearly 7% of children under 18 have been diagnosed with an eye condition, with about 3% experiencing blindness or visual impairment. Vision loss ranks among the top 10 causes of disability in adults over 18 and is a prevalent disabling condition in children. The four most common eye conditions leading to significant vision loss or blindness are cataracts, retinopathy, glaucoma, and age-related macular degeneration (AMD). Genetics plays a major role in most of these conditions. 

The Eye Disorder Next Generation Sequencing (NGS) panel investigates germline variations in genes associated with these disorders and other conditions with similar phenotypes. 

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Purpose of the Eye Disorder Genetic Test 

The Eye Disorder genetic testing panel is suitable for individuals with a personal or family history of eye disorders, particularly when multiple family members are affected. Emerging gene therapy technologies for retinopathies and other genetic eye disorders are becoming more accessible. Unlike other organs, the eyes are relatively easy to target for gene therapy. As treatment options advance, early diagnosis of eye disorders becomes essential. The clinical utility of genetic testing for eye disorders encompasses both prevention and treatment options. 

This panel aids in confirming diagnoses and guiding treatment strategies. Individuals with eye disorders may benefit from potential g priate diagnosis. 

Clinical Utility 

The Eye Disorder genetic testing panel results in personalized treatment and symptom management, informs family members about their risk factors, connects patients to relevant resources and support, and provides options for family planning. 

Methodology 

The test searches for inherited genetic variations (germline mutations) associated with eye disorders. Genes, composed of DNA sequences, provide instructions for building proteins. Variants of these genes can differ slightly and may impact health, such as those linked to optic atrophy and retinitis pigmentosa. 

Several genes are associated with eye disorders like AMD, a condition where the macula in the retina is damaged, leading to a loss of central vision while peripheral vision typically remains unaffected. Night blindness is another genetic condition characterized by impaired vision in dim light. Retinitis pigmentosa (RP) consists of rare genetic diseases affecting the retina, where retinal cells gradually break down, resulting in vision loss. 

Testing may confirm whether an individual carries a harmful (pathogenic) variant in these genes, indicating a hereditary syndrome. 

The Eye Disorder genetic test panel examines a specific set of genes for genetic changes compared to human reference variants linked to eye disorders. The Berries Health Eye Disorders and Retinopathies Panel is a Laboratory Developed Test (LDT) validated by Berries Health lab partner, utilizing Twist Exome 2.0 and Illumina NovaSeq6000 Next Generation Sequencing (NGS) Platform. This clinical LDT test has not been cleared or approved by the FDA. 

Outcomes of Genetic Test Results 

  1. Positive Result: A positive result indicates the identification of a pathogenic variant linked to an eye disorder. Some eye disorders are dominant, requiring only one defective gene copy to manifest, while others are recessive, necessitating both copies. A heterozygous pathogenic variation suggests the individual is a carrier, potentially without displaying symptoms. This knowledge helps patients and healthcare providers understand and manage treatment plans effectively. 
  2. Variation of Uncertain Significance (VUS): If genetic testing reveals a change not previously associated with eye disorders, the result may be classified as a VUS. This indicates uncertain significance, suggesting the information does not clarify the individual’s disease risk and is not typically used for healthcare decision-making. As research progresses, some variants may be reclassified. Thus, maintaining communication with healthcare providers for updates on variant findings is crucial. 
  3. Negative Result: A negative test result signifies that no specific disease-linked variants were detected in the genes tested. This suggests the individual does not have genetic variations associated with eye disorders within the analyzed panel. 

      Limitations of Testing 

      This test is designed to identify germline pathogenic variants, including single nucleotide polymorphisms (SNPs) and small insertions and deletions (indels) of up to 1 kilobase pair (kbp). It also analyzes mutations within coding regions and the exon-intron boundaries, specifically within 50 base pairs. Any deletions or duplications larger than 1 kbp that are reportable will be confirmed using orthogonal methods before being included in the final report.

      Berries Health Eye Disorders and Retinopathies (Eye) Panel

      1 ABCA4
      2 ABCB6
      3 ABCC6
      4 ABCD1
      5 ABHD12
      6 ACBD5
      7 ACO2
      8 ACTB
      9 ADAM9
      10 ADAMTS18
      11 ADGRV1
      12 ADIPOR1
      13 AGBL1
      14 AGBL5
      15 AGK
      16 AIPL1
      17 ALDH1A3
      18 AMACR
      19 ARHGEF18
      20 ARL2BP
      21 ARL3
      22 ARL6
      23 ATF6
      24 ATOH7
      25 ATXN7
      26 AUH
      27 BBIP1
      28 BBS1
      29 BBS10
      30 BBS12
      31 BBS2
      32 BBS4
      33 BBS5
      34 BBS7
      35 BBS9
      36 BCOR
      37 BEST1
      38 BFSP1
      39 BFSP2
      40 BLOC1S3
      41 BLOC1S6
      42 BMP4
      43 C21orf2
      44 C2orf71
      45 C1QTNF5
      46 C8orf37
      47 CABP4
      48 CACNA1F
      49 CACNA2D4
      50 CAPN5
      51 CAV1
      52 CC2D2A
      53 CDH23
      54 CDH3
      55 CDHR1
      56 CEP250
      57 CEP290
      58 CERKL
      59 CFH
      60 CFI
      61 CHD7
      62 CHM
      63 CHMP4B
      64 CHN1
      65 CHST6
      66 CIB2
      67 CLDN19
      68 CLRN1
      69 CNGA1
      70 CNGA3
      71 CNGB1
      72 CNGB3
      73 CNNM4
      74 COL18A1
      75 COL4A1
      76 COL8A2
      77 CRB1
      78 CRX
      79 CRYAA
      80 CRYAB
      81 CRYBA1
      82 CRYBA2
      83 CRYBA4
      84 CRYBB1
      85 CRYBB2
      86 CRYBB3
      87 CRYGB
      88 CRYGC
      89 CRYGD
      90 CRYGS
      91 CST3
      92 CTDP1
      93 CTNNA1
      94 CTNNB1
      95 CTSD
      96 CX3CR1
      97 CYP1B1
      98 CYP4V2
      99 DCN
      100 DHDDS
      101 DHX38
      102 DRAM2
      103 DTNBP1
      104 EFEMP1
      105 ELOVL4
      106 EMC1
      107 EPHA2
      108 EYA1
      109 EYS
      110 FAM161A
      111 FBLN5
      112 FLVCR1
      113 FOXC1
      114 FOXE3
      115 FOXL2
      116 FRMD7
      117 FSCN2
      118 FYCO1
      119 FZD4
      120 GALK1
      121 GCNT2
      122 GDF3
      123 GDF6
      124 GFER
      125 GJA1
      126 GJA3
      127 GJA8
      128 GJB2
      129 GJB6
      130 GNAT1
      131 GNAT2
      132 GNB3
      133 GPR143
      134 GPR179
      135 GRK1
      136 GRM6
      137 GUCA1A
      138 GUCA1B
      139 GUCY2D
      140 HARS
      141 HGSNAT
      142 HK1
      143 HMCN1
      144 HMX1
      145 HSF4
      146 HTRA1
      147 IARS2
      148 IDH3A
      149 IDH3B
      150 IFT140
      151 IFT172
      152 IFT27
      153 IGFBP7
      154 IMPDH1
      155 IMPG1
      156 IMPG2
      157 IQCB1
      158 ITM2B
      159 JAM3
      160 KCNJ13
      161 KCNV2
      162 KERA
      163 KIAA1549
      164 KIF21A
      165 KIZ
      166 KLHL7
      167 KRT12
      168 KRT3
      169 LCA5
      170 LCAT
      171 LEMD2
      172 LIM2
      173 LOXL1
      174 LRAT
      175 LRIT3
      176 LRP5
      177 LSS
      178 LTBP2
      179 LZTFL1
      180 MAB21L2
      181 MAF
      182 MAK
      183 MERTK
      184 MFRP
      185 MIP
      186 MIR184
      187 MKKS
      188 MKS1
      189 MSMO1
      190 MYOC
      191 NAA10
      192 NDP
      193 NEK2
      194 NHS
      195 NMNAT1
      196 NR2E3
      197 NR2F1
      198 NRL
      199 NTF4
      200 NYX
      201 OAT
      202 OFD1
      203 OPA1
      204 OPA3
      205 OPTN
      206 OTX2
      207 OVOL2
      208 P3H2
      209 PAX6
      210 PCDH15
      211 PCYT1A
      212 PDE6A
      213 PDE6B
      214 PDE6C
      215 PDE6G
      216 PDE6H
      217 PDZD7
      218 PHOX2A
      219 PIKFYVE
      220 PITPNM3
      221 PITX2
      222 PITX3
      223 PLA2G5
      224 PLK4
      225 POC1B
      226 PRCD
      227 PRDM5
      228 PROM1
      229 PRPF3
      230 PRPF31
      231 PRPF4
      232 PRPF6
      233 PRPF8
      234 PRPH2
      235 PRSS56
      236 PXDN
      237 RAB28
      238 RARB
      239 RAX
      240 RAX2
      241 RB1
      242 RBP3
      243 RBP4
      244 RD3
      245 RDH11
      246 RDH12
      247 RDH5
      248 REEP6
      249 RGR
      250 RGS9
      251 RGS9BP
      252 RHO
      253 RIMS1
      254 RLBP1
      255 ROBO3
      256 ROM1
      257 RP1
      258 RP1L1
      259 RP2
      260 RP9
      261 RPE65
      262 RPGR
      263 RPGRIP1
      264 RS1
      265 RTN4IP1
      266 SAG
      267 SALL2
      268 SDCCAG8
      269 SEMA4A
      270 SIPA1L3
      271 SIX6
      272 SLC16A12
      273 SLC24A1
      274 SLC33A1
      275 SLC38A8
      276 SLC4A11
      277 SLC4A4
      278 SLC7A14
      279 SMOC1
      280 SNRNP200
      281 SOX2
      282 SPATA7
      283 STRA6
      284 TACSTD2
      285 TCF4
      286 TDRD7
      287 TEAD1
      288 TENM3
      289 TFAP2A
      290 TGFBI
      291 TIMP3
      292 TMEM126A
      293 TOPORS
      294 TRIM32
      295 TRNT1
      296 TRPM1
      297 TSPAN12
      298 TTC8
      299 TTLL5
      300 TUB
      301 TUBB3
      302 TUBGCP4
      303 TUBGCP6
      304 TULP1
      305 UBIAD1
      306 UNC119
      307 UNC45B
      308 USH1C
      309 USH1G
      310 USH2A
      311 VAX1
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